Sam Buck Johnson's Projects
Statistical learning for AFQ results
backup (stub) for ccnn refactor in progress
MRI QC using deep learning - braindr
UNets for neuroimaging, cortical parcellation
Convolutional neural networks for analysis of cortical anatomy; experiments with different network architectures and input formats + data augmentation
A place to follow along with Stanford's CS 330 in Fall 2022
Collection of deep learning utilities
tutorial: https://docs.github.com/en/get-started/quickstart/hello-world
A meta-learning approach to solving ARC (Abstraction and Reasoning Corpus)
Implementation of transformer lens in JAX
Simple code for testing the labor theory of value using IO tables
Training Sparse Autoencoders on Language Models
Sulcal labeling using a vision transformer (ViT) U-Net.
Cortical segmentation into multiple ROIs using a 3d unet applied to full 3d T1 anatomical MRI scans.
Machine learning for NeuroImaging in Python
Automated Fiber Quantification ... in Python
A place for miscellaneous python examples / templates.
3D U-Net model for volumetric semantic segmentation written in pytorch
Config files for my GitHub profile.
a public collection of notes, summaries, and thoughts
A tutorial on convenient tools for use with the Sherlock computing cluster
SphericalLabeling: Cortical Surface Labeling using Spherical Data Augmentation and Context-aware Training
A general purpose citizen science game template for scientific research
Investigation of automata in trained transformer models
UNet-based cortical parcellation