Comments (2)
Now published as https://www.nature.com/articles/s41592-019-0598-1
Original repo: https://github.com/churchlab/UniRep
Jax-rewrite: https://github.com/ElArkk/jax-unirep
Docs: https://elarkk.github.io/jax-unirep/getting-started/
jax-unirep requires python 3.7. Given that this isn't due to some dependency requiring 3.7, we can ask the authors to relax the requirement to 3.6.
jax from pypi by default is cpu and requires some workarounds for GPU support (https://github.com/google/jax#pip-installation).
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Same as #22 (comment)
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Related Issues (20)
- Text on embed.predictprotein.org HOT 1
- Protocol deepblast: AttributeError: can't set attribute
- Protocol esm: UnpicklingError: invalid load key, '<'. HOT 1
- Package dependency error. HOT 2
- Feature Request: Add Worker version to status API
- segmentation fault HOT 1
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- AssertionError: Failed in nopython mode pipeline (step: native lowering) Storing i64 to ptr of i32 ('dim'). FE type int32
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- Update jax-unirep dependency version
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- Custom embeddings
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