Comments (4)
abkosar
commented on August 20, 2024
Hey @rmarkello -- Are you looking for someone working on the issue?
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rmarkello
commented on August 20, 2024
Hi @abkosar ! Sorry for the delay—I was away from the internet for a while and am just getting back into things.
If you're willing to take a whack at this that would be awesome !
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abkosar
commented on August 20, 2024
Hey @rmarkello! Sure sounds good to me! I will start working on it and create a PR when done!
Thanks!
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rmarkello
commented on August 20, 2024
Closed by #62.
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Related Issues (20)
- Section 3.1 error HOT 5
- TypeError: argument of type 'method' is not iterable HOT 4
- Output normalized values HOT 2
- Passing donor masks to `get_samples_in_mask` returns wrong coordinates
- Donor-specific atlases and tolerance=0 fails for two donors
- Intensity-based probe filtering for each donor separately HOT 2
- Cerebellum and Corpus callosum in the included examples atlas (DK)
- the expression results vary greatly with the same atlas at different space resolution. HOT 3
- Differential stability values HOT 4
- Issue with relabel_gifti?
- Bug with tests/mouse/test_gene.py
- Strange sample numbers/`NaN` expression values returned when using text file-based masks/parcellation HOT 1
- How to get expression data based on Destrieux atlas
- There is a error while add parameter "--ibf_threshold 0.5" in command line HOT 1
- Problems downloading microarray data HOT 2
- Error in running 3.1
- Question about normalization method before differential expressed gene (DEG) analysis.
- Update about using custom parcellation
- BUG Report: Something wrong with the sample assignment when using Brainnetome atlas
- BUG Report: Something wrong with the sample assignment when using Brainnetome atlas(abagen.get_samples_in_mask)
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