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adorym-e

Adorym: Automatic Differentiation-based Object Reconstruction with DynaMical Scattering - Enhanced

alodeck

Automated Live Object-recognition Derived Controller Kit (ALODeCK)

cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

csbdeep

Image restoration for fluorescence microscopy

dacapo

Development fork for Dacapo implementation of CARE, CycleGAN, SplitGAN

daisy

Block-wise task scheduling for large nD volumes.

dl-mbl-2022

Exercise repository for the "Deep Learning for Microscopy Image Analysis" course at the MBL.

drugowitsch-rotation

Kalman filtering for self-motion and object tracking, produced under the mentorship of Jan Drugowitsch

exploration_uncertainty

Analysis code for multi-armed bandit task

funlib.learn.torch

Pytorch Models

gunpowder

A library to facilitate machine learning on multi-dimensional images.

itfbarcode

jeffsmatland

Matlab, Teensy, and other goodies

mocapmujoco

Suite (Matlab/python/mujoco xml) for rendering, viewing, and analyzing subject motion capture data with mujoco.

neuronavigator

pinthesisscripts

plastix

Meta-Learning Plasticity Rules in Neural Networks

scripts

ssm

Bayesian learning and inference for state space models