reubwn Goto Github PK
Name: Reuben W Nowell
Type: User
Company: University of Stirling
Bio: Lecturer in Animal Evolutionary Biology at the University of Stirling
Location: Cottrell Building, Biological and Environmental Sciences
Reuben W Nowell's Projects
bayestraits-wrapper
Perl wrapper scripts for running the BayesTraits program with gene presence/absence data across multiple genomes
bdelloid
scripts and pipelines for the bdelloid genomes project
bdelloid-immunity
scripts for analysis of DE experiment
bdevolver
simulating nucleotide evolution with mutation, drift, gene conversion and horizontal transfer
cgp-scripts
Resources for the Caenorhabditis genome project
collinearity
scripts to parse and analyse MCScanX collinearity output
ff
scripts for bid sorting
hgt
scripts for the analysis of HGT in genome sequence data
microhomology
scripts for extracting alignments from MCScanX results and testing for microhomology
orthomclqc
A collection of scripts for QC / summarising OrthoMCL output
qsub-scripts
collection of PBS qsub scripts
recomb
detection of recombination (Hudson's 4-gamete) from phased VCF
reubwn.github.io
scripts
Useful scripts for various things
te-evolution
scripts to look at TE synteny changes across multiple genomes
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