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Rembrandt Bakker's Projects

bas-files icon bas-files

Contains atlas definition files for the Brain Addressing System

brainaddress icon brainaddress

A brain address points to a location in a reference brain, publicly hosted by one of our registered brain atlas providers.

cocomac-engine icon cocomac-engine

The engine that powers the cocomac.g-node.org website (search wizard and interactive results)

cocomac-jsondb icon cocomac-jsondb

Contains the raw data of cocomac in more or less human readable form

fancylog icon fancylog

Fancy logging tool for python pipelines

fancypipe icon fancypipe

FancyPipe is a lightweight python package for running data processing pipelines. It takes care of parallel processing, html-based logging, parameter management, garbage collection and error handling.

fancysite icon fancysite

Need a website with a consistent layout, but want to write your own php/html? FancySite is an extremely lightweight library that allows you to take

fiind icon fiind

Ferret interactive integrated neurodevelopment atlas. Check out the website https://neuroanatomy.github.io/fiind/

json.minify icon json.minify

Simple minifier for JSON to remove comments and whitespace

multiatlasregistration icon multiatlasregistration

Multi Atlas Registration pipeline for estimating brain areas in MRI images on the basis of a set of manually segmented examples.

x3dom icon x3dom

X3DOM. A framework for integrating and manipulating X3D scenes as HTML5/DOM elements.

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