rando2 Goto Github PK

2017-09-21-uiuc

a7

annorxiver

Annotating Rxiv preprints in an automated fashion

covid-19_sinai_reviews

covid19-review

A collaborative review of the emerging literature on diagnostics and treatments related to COVID-19

docxtomanubot

Extract track changes from the body of a DOCX file and push to a manubot project

dtcdog-ms

foxmap

Scripts for Chromosome Assembly of the Red Fox

foxymarkers

scripts associated with Rando et al. (2017) Y-Chromosome Markers for the Red Fox

genemappertocsv

Take GeneMapper output files and convert them into a single table in CSV format, allowing you to organize all genotypes for a single individual

greenelab.com

The website source code for greenelab.com

greenelab.com-1

The website source code for greenelab.com

haverford_superlab21

Code for the Spring semester of Superlab

htcgenotyping

Here is a pipeline I developed to run GATK for variant calling on the biocluster at UIUC, which uses a slurm queue management system

javatest

jgrade2

An update to the original jGrade for Java 17 and jUnit 5

lab-website-template

(Pre-release) An easy-to-use, flexible website template for labs, with automatic citations, GitHub tag imports, pre-built components, and more

mashmap

A fast approximate aligner for long DNA sequences

matss

R Package for Macroecological Analysis of Time Series Structure (MATSS)

mpmp-manuscript

msy_mifish

Scripts for working with mifish data

mtdna-network

Code & data for red fox mtDNA network construction in pegas (modified)

onboarding

Onboarding materials for the Greene Lab

pegas

Population and Evolutionary Genetics Analysis System

python-docx

Create and modify Word documents with Python

rheum-plier-data

Data repository for the MultiPLIER project

rootstock

Clone me to create your Manubot manuscript

snpscans

Some scripts for analyzing signals of selection across the fox genome

try-manubot

playground for testing manubot features

vbo_scrapeclubs

Code to scrape data from kennel clubs