Name: Ralitsa R. Madsen
Type: User
Company: UCL Cancer Institute
Bio: Biomedical scientist, PhD in Medical Science at the University of Cambridge (Metabolic Research Laboratories, IMS). Current: Henry Wellcome Postdoctoral Fellow.
Location: London, United Kingdom
Ralitsa R. Madsen's Projects
Code for python-based quantitative image and data analysis in "Dynamic buffering of extracellular chemokine enables robust adaptation during directed tissue migration" by Wong and colleagues.
python scripts to analyze data from single knockout or double knockout CRISPR genetic screens
A short script for converting .csv file data into an .fcs file, and vise versa.
Pipeline for analysing and visualising CyTOF datasets, with a focus on PTM signalling networks.
Code for Dharia NV, et al. A First-Generation Pediatric Cancer Dependency Map. Nature Genetics 2021.
This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL