quinlan-lab Goto Github PK
Type: Organization
Type: Organization
Applied Computational Genomics Course at UU: Spring 2020
an API for intersections of genomic data
BED QC tool (in the making)
Building the constrained coding regions (CCR) model
A small repo for storing the code for making the files and html for CCRs.
Code used for figure generation and statistical analysis for https://elifesciences.org/articles/46922
Pipeline for tracking tumor clone evolution over time and space.
simple coverage profile of aligned samples. useful for sequencing center feedback and topoffs.
Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata
CCR model
nextflow implementation of the facets data flow.
a better freebayes-parallel
conda recipes for genomic data
pythonic wrapper for htslib
code used for figure generation and statistical analysis for manuscript
compare sequences to a shared root reference sequence.
language-agnostic testing for inheritance models
probability of mendelian error in trios.
pathoscore evaluates variant pathogenicity tools and scores.
Precision Oncology data workflow
Code for reproducing analysis and figures from https://elifesciences.org/reviewed-preprints/89096
Regional analysis folder
Nextflow implementation of the smoove workflow and other tools for SV calling and QC
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.