porchard Goto Github PK
Name: Peter Orchard
Type: User
Company: University of Michigan
Bio: Bioinformatician in the @ParkerLab at Michigan Medicine, working on epigenomic, transcriptomic, and single-cell data
Location: USA
Name: Peter Orchard
Type: User
Company: University of Michigan
Bio: Bioinformatician in the @ParkerLab at Michigan Medicine, working on epigenomic, transcriptomic, and single-cell data
Location: USA
Standard Parker Lab ATAC-seq processing pipeline in Snakemake form
A toolkit for QC and visualization of ATAC-seq results.
NextFlow implementation of https://github.com/battle-lab/crossmap
C++ implementation of Buenrostro adapter trimming
Recreate the computational analyses from Orchard, White, Thomas et al
for bioinf 527 git demo
Fetch 1:1 gene orthologues for two species from Ensembl Compara
GTEx & TOPMed data production and analysis pipelines
R package for integrating and analyzing multiple single-cell datasets
Normalize bedgraph files
Utilities I commonly use for my work in the Parker lab.
Collection of analysis tools for quantitative trait loci
A complete tool set for molecular QTL discovery and analysis
Single Cell Analysis of Five'Ends
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.