poneill Goto Github PK

advent-of-code

advent of code 2022 in haskell

amic

BIOL 495 ChIP-Seq lab

bib

My BibTeX bibliography, open-sourced

bin

short shrift for shell scripts

biopython

Official git repository for Biopython (converted from CVS)

brainlove

Experimental brainfuck interpreters and compilers in Haskell

bubs

Keras Implementation of Flair's Contextualized Embeddings

bugss_talk

bystro

Bystro genetic analysis (annotation, filtering, statistics)

chem_pot_study

Code for a study of exact computation of the chemical potential in transcription factor binding models

chipsecret

Machine learning for higher-order regulatory features in chip-seq datasets

coconut

A model of border cell migration in Drosophila

collectf

CollecTF database implementation

correlation_analysis

covid-modeling

cs344

Introduction to Parallel Programming class code

deepspeech

A TensorFlow implementation of Baidu's DeepSpeech architecture

demos

dem O's: a dynamical systems approach to parameter estimation for Oriole phylogenetics

dna_geometry

doubly_intractable

emacs-config

eight machines and constantly synching

entropy_estimation

A Python library for entropy estimation

estremo-lite

A lightweight implementation of Estremo for the web

fenrir

transcription factor binding site search and analysis

formosa

FOR MOtif SAmpling

funcy

A fancy and practical functional tools

gill_alg

Implementation of stochastic simulation for arbitrary reaction systems

gini_project

Exploratory analysis of disparities in IC/position in TFBS motifs

glsigma

notes and analysis for the glsigma model of transcription factor statistics

hack_umbc

repo for HackUMBC 2013