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bioconda-recipes

Conda recipes for the bioconda channel.

caldera

Ultra-fast, Bloom filter-based sequence search

cov_tracker

EDGE COVID19 variant tracking

csis

Code Safety Inspection Service

dash-oil-and-gas-demo

Dash Demo App - New York Oil and Gas

dash_template

Python Dash data visualization template

detaxa

A flexible, adaptable, and well-defined python package for taxonomy and accession number lookup.

epicov_downloader

Download all EpiCoV sequcnes from GISAID

freyja

Depth-weighted De-Mixing

gottcha

More details and updates can be found in our homepage and LANL-Bioinformatics Github site (https://github.com/LANL-Bioinformatics/GOTTCHA). Please visit our homepage at

gottcha2

Genomic Origin Through Taxonomic CHAllenge (GOTTCHA) v2 BETA

metarba

This is a repo for the workflow of NMDC Read-based Analysis

miccr

MInimap2 Contig ClassifieR

pangia

PanGIA (Pan-Genomics for Infectious Agents)

pangia-1

phyd3

This is a fork of the original phyd3 for LANL COVID19 assay validation.

readbasedanalysis

sra_tracker

sra_tracker_covid19

variant_viz

Repo for SARS-CoV-2 visualization

workflowplanning

This is primarily a repo for capturing policies and discussions around the different workflows for NMDC. This is also used for project management related pieces.