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followers: 26.0 following: 47.0 repos: 99.0 gists: 25.0

Name: Patrick

Type: User

Bio: Curiosity-driven data scientist with a background in machine learning, neuroscience and healthcare.

Location: Philadelphia, PA

Hi there 👋

Hi! I’m Patrick. I’m a curiosity-driven data scientist with a background in machine learning, neuroscience and healthcare. I’m passionate about combining data with curiosity to make healthcare better for everyone.

A few of my interests 🌱

Applied AI in Healthcare - how can data practitioners best collaborate with healthcare professionals to improve patient outcomes?
Data Interoperability - how can we make various health data play well together?
Algorithmic Fairness - how can we ensure data-driven solutions provide all patients with optimal and equitable care?

I also enjoy supporting aspiring analytics professionals with their career goals. Feel free to reach out 🙂

Small side projects/excuses to code 🔭

Various small utility packages 🔧
- pycr - readthedocs Python
- pyicd - readthedocs Python
- Gems.jl - readthedocs Julia
- MolecBio.jl - readthedocs Julia
- Propensity.jl Julia
Tutorials
- A Quick Intro to Julia's PyCall and RCall Packages Julia, Python and R
- Deploy a Python Machine Learning Model on Your iPhone Python and Swift
- Data Structures and Algorithms Python

Patrick's Projects

2017-slides

Slides and talk assets from PyCon 2017

3d_imaging

advanced_training

Advanced Scikit-learn training session

airflow-review

mini-review of apache airflow functionality

awesome-healthcare

Curated list of awesome open source healthcare software, libraries, tools and resources.

axondeepseg

Axon/Myelin segmentation using Deep Learning

becoming_fluent_in_spark

Distributed computing using Apache Spark for machine learning applications

bioinformatics

bioinformatics

boston_housing

Repo for Udacity Boston Housing Prices Linear Regression Models

breast-cancer-wisconsin-diagnostic-dataset

Supervised Machine Learning for Breast Cancer Diagnoses

cdc

Supervised Clinical Document Classification Pipeline

chainml

WIP: Support tools for common steps in an ML pipeline

cheatsheets-ai

Essential Cheat Sheets for deep learning and machine learning researchers

circleci_setup

cloud_computing

Sandbox to road test cloud computing resources

codereviewfun

sample code taken from code review stack exchange to practice code review

coding-challenge

dash_plotly_matplotlib_work

data-science-with-julia

Exploring data science through Julia programming language

data_science_by_example

Examples of Data Science Tools & Libraries

dataframes-cheatsheet

Cheatsheet for basic Dataframe operations in R, Julia and Python

datascience-anthology-pydata

PyData, The Complete Works of

deep-learning-book

MIT Deep Learning Book in PDF format

deep_learning

repo for ANN, CNN, LSTM, word2vec projects

deep_learning_tutorials_practice

Repo using Keras wrapper for Tensor Flow - ANN, CNN, RNN - LSTM

diacom_utils

Small utility to help preprocess medical diacom files when using the pydiacom library

distributions

Udacity tutorial

dockerproj

This is for a docker workflow

dsa

Data Structures and Algorithms

dsguide

IOS app using new SwiftUI framework in Xcode 11 beta

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