pjtorres Goto Github PK
Name: Pedro J. Torres
Type: User
Company: Persephone Biosciences
Bio: Bioinformatics | Data Science | Microbiome
Twitter: PedroJTorres_
Location: San Diego, CA
Name: Pedro J. Torres
Type: User
Company: Persephone Biosciences
Bio: Bioinformatics | Data Science | Microbiome
Twitter: PedroJTorres_
Location: San Diego, CA
Some tools made along the way when analyzing 16S amplicon data and metagenomics processing code
AJ analysis
ATBResist_CARDS
New to Bioinformatics? Start Here!
Code and notebooks for BIOM262
Robs manual for the computational genomics and bioinformatics class
Detection of incorrectly labeled sequences across kingdoms
Code used to analyze and interpret 16S results from both a pubertal and adult PCOS mouse model
code for processing metagenomics data
Analyzing shotgun data
SAMSA pipeline, version 2.0. This version supports use on a local cluster using DIAMOND for annotations.
Stream lit apps
currently_trained_taxonomic classifier
xtract_forward allows you to extract your unmmerged high quality R1 reads
Basic work flow and scripts to analyze Viral metagenomics: Trimming, quality checking, contamination removal and annotation
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Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.