Comments (4)
ben18785
commented on June 18, 2024
This should be added to all MCMC routines.
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MichaelClerx
commented on June 18, 2024
Why was this closed? I don't see any changes to the adaptive mcmc routine.
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MichaelClerx
commented on June 18, 2024
Another question: Should we implement criteria like these in the results object?
I'd still like to have an interface like the one CMA-ES uses, where control is passed back to the user at every iteration. That would allow you to implement all disk-storage, output, statistical stopping criteria etc. exactly once, without having to do it separately in every method
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ben18785
commented on June 18, 2024
I closed it because it was implemented in _diagnostics. R hat is implemented in the MCMC result object, yes. We don't need it here.
… On 15 Jan 2018, at 20:47, Michael Clerx ***@***.***> wrote:
Another question: Should we implement criteria like these in the results object?
I'd still like to have an interface like the one CMA-ES uses, where control is passed back to the user at every iteration. That would allow you to implement all disk-storage, output, statistical stopping criteria etc. exactly once, without having to do it separately in every method
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Related Issues (20)
- Refactor NoUTurnMCMC for pickling HOT 9
- OptimisationController.set_parallel() no longer speeds up optimisation for CMAES HOT 1
- Add testing on 3.10 HOT 1
- Tiny typo in plot docs
- Don't use the variable name "values" in the examples
- Extended scatter search optimiser
- Optionally copy logpdfs before running mcmc HOT 3
- sample generative model HOT 1
- Stan interface notebook is broken HOT 1
- Transformed rectangular boundaries HOT 5
- Chained transformations
- UnitCubeTransformation or ScalingTranslationTransformation
- ScalingTransformation has visible properties, could do with better docs
- Add and fix HABC sampler using SGHMC HOT 1
- Header of logged "time" field is wrong HOT 3
- Can't reproduce Stochastic Degradation model: No module named 'pints.toy.stochastic' HOT 4
- NUTS coroutines don't work on Python 3.11 HOT 5
- badges not displaying in readme.md
- Settings of XNES HOT 2
- Likelihood for censored data
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