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Nikolaus Sonnenschein's Projects

bicbpy icon bicbpy

Bioinformatics and Computational Biology with Python

cobrapy icon cobrapy

COBRApy is a package for constraint-based modeling of biological networks

cobratoolbox icon cobratoolbox

COnstraints Based Reconstruction and Analysis toolbox for MATLAB

d3 icon d3

A JavaScript visualization library for HTML and SVG.

d3play icon d3play

A sandbox for biological visualizations using d3 and other web technologies

eggnog-mapper icon eggnog-mapper

Fast genome-wide functional annotation through orthology assignment

escher icon escher

(formely visbio) Visualizations for systems biology.

fabric icon fabric

Simple, Pythonic remote execution and deployment.

failed_models icon failed_models

A repository of reconstructions which I cannot parse and solve

fbaproject icon fbaproject

Flux Balance Analysis using the GNU Linear Programming Kit (GLPK)

gurobiml icon gurobiml

GurobiML provide a MathLink interface to Gurobi's LP/MIP solvers

homebrew icon homebrew

:beer: The missing package manager for OS X.

iprogress icon iprogress

Fork of http://code.google.com/p/python-progressbar/ with IPython notebook support

markdown-cv icon markdown-cv

a simple template to write your CV in a readable markdown file and use CSS to publish/print it.

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