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Sandro's Projects

adjusttext icon adjusttext

A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

aiostream icon aiostream

Generator-based operators for asynchronous iteration

annarchy icon annarchy

ANNarchy (Artificial Neural Networks architect) is a parallel simulator for rate-coded and spiking neural networks.

arbor icon arbor

The Arbor multi-compartment neural network simulation library.

astrovascpy icon astrovascpy

Vasculature blood flow computation and impact of astrocytic endfeet on vessels

biopython icon biopython

Official git repository for Biopython (originally converted from CVS)

cmap icon cmap

Scientific colormaps for python, with only numpy dependency

codecmapper icon codecmapper

Build mapping files derived from Java Charsets which can be processed by Python's gencodec.py.

compressed_rtf icon compressed_rtf

Compressed Rich Text Format (RTF) compression and decompression in Python

contrib icon contrib

Contributed stuff for munin (plugins, tools, etc...)

dipy icon dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

efel icon efel

Electrophys Feature Extraction Library

ephyviewer icon ephyviewer

Simple viewers for ephys signals, events, video and more

fedmsg icon fedmsg

Federated Messaging with ZeroMQ

gdcm icon gdcm

Grassroots DICOM read-only mirror. Only for Pull Request. Please report bug at http://sf.net/p/gdcm

grok icon grok

World's Leading Open Source JPEG 2000 Codec

iv icon iv

Needed for NEURON GUI

libsbml icon libsbml

LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, JavaScript, MATLAB, Perl, PHP, Python, R and Ruby.

limits icon limits

Rate limiting using various strategies and storage backends such as redis & memcached

mailprocessing icon mailprocessing

Maildir and IMAP folder processing with user-defined Python scripts

medimages4tests icon medimages4tests

Generate dummy medical images, with junk image data but realistic headers, to test imaging handling pipelines

morphio icon morphio

A python and C++ library for reading and writing neuronal morphologies

munin icon munin

Main repository for munin master / node / plugins

netpyne icon netpyne

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.

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