Sihua Peng's Projects
An open toolkit for building and benchmarking general virtual agents in the wild
Open source code for AlphaFold.
TensorFlow code and pre-trained models for BERT
Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining
Simple Parameter-efficient Fine-tuning for Transformer-based Masked Language-models
A protein language model for learning the SARS-CoV-2 fitness landscape
Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
A generative latent variable model for biological sequence families.
DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
An advanced guide to learn English which might benefit you a lot π . 离谱ηθ±θ―ε¦δΉ ζε/θ±θ―ε¦δΉ ζη¨γ
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.
Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"
Deep mutational scanning of H5 VEP
GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics
An implementation of model parallel autoregressive transformers on GPUs, based on the DeepSpeed library.