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Welcome to my GitHub 👋

I'm Phil, a Software/Machine Learning Engineer living in Austin, Texas, currently working for Radformation.

My passion is translating Medical Physics and Radiation Oncology research into the clinic. My research interests include Medical Image Analysis and Artificial Intelligence, in particular auto-segmentation of medical images.

I'm co-creator of PlatiPy, a toolkit for medical image analysis in Python. I also co-created PyDicer which allows researchers to streamline the conversion and analysis of Radiotherapy DICOM data. I'm also currently a maintainer of the fantastic pymedphys project!

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Phil Chlap's Projects

loguru icon loguru

Python logging made (stupidly) simple

neurocontainers icon neurocontainers

The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines

rt-utils icon rt-utils

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

totalsegmentator icon totalsegmentator

Tool for robust segmentation of 104 important anatomical structures in CT images

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