Name: Philip Burnham
Type: User
Company: University of Pennsylvania
Bio: Postdoc studying cell fate and organoids with Raj Lab at UPenn. Previously studied infectious disease and genomics with the De Vlaminck Lab at Cornell.
Twitter: philip_burnham
Blog: https://philburnham.dev/
Philip Burnham's Projects
Files related to DART-seq technique including transcriptome analysis, image analysis, and viral genetic analysis.
Pipeline to predict cell state from nuclear features.
RNAseq workflow using snakemake workflow with Kallisto.
R package and vignette to denoise metagenomic cell-free DNA sequencing data.
This is the code base for the pygame tutorials posted on my YouTube channel.
Collection of random (and probably super specific) tools that I've found helpful.
RNA-seq workflow using STAR and DESeq2
a collection of tools I have made
UPenn ?