Comments (2)
Tracked in https://github.com/PavlidisLab/Infrastructure/issues/71
from rnaseq-pipeline.
This might be relevant: https://bugs.schedmd.com/show_bug.cgi?id=292
We have a maximum number of open files of 1024:
ulimit -a
Maximum size of core files created (kB, -c) 0
Maximum size of a process’s data segment (kB, -d) unlimited
Maximum size of files created by the shell (kB, -f) unlimited
Maximum size that may be locked into memory (kB, -l) 64
Maximum resident set size (kB, -m) unlimited
Maximum number of open file descriptors (-n) 1024
Maximum stack size (kB, -s) 8192
Maximum amount of cpu time in seconds (seconds, -t) unlimited
Maximum number of processes available to a single user (-u) 4096
Maximum amount of virtual memory available to the shell (kB, -v) unlimited
I'm going to try to see if I can reproduce this bug.
from rnaseq-pipeline.
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