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Name: Oleg Lenive
Type: User
Name: Oleg Lenive
Type: User
A Julia script for comparing the coverage between two chromosomes for a set of sequenced DNA samples.
A centralized location for storing curated data ready for inclusion in cBioPortal.
A public python implementation of the DeepHyperNEAT system for evolving neural networks. Developed by Felix Sosa and Kenneth Stanley. See paper here: https://eplex.cs.ucf.edu/papers/sosa_ugrad_report18.pdf
Tool for systematically creating and running jobs via job files on the LSF queuing system.
Official website for the Rapier physics engine.
Code used for benchmarking of the two-state model simulated using Gillespie or the Poisson sampler (Psampler) siumlation method described in Lenive et al 2016 (Inferring extrinsic noise from single-cell gene expression data using approximate Bayesian computation). Please note that this is intended as a benchmark only and is not a stand-alone tool in it's current version. An example file containing model parameters is found in the data directory. The path to this file is currently hard-coded. To run the benchmark: make ./benchmark.exe Depends on a C++ compiler and libgsl for random number generation (see Makefile). The model is hard coded in the Gillespie algorithm file and (unavoidably) in the Psampler. Aims: - Read nominal parameter vectors from rows in a text file. - Implement a noise function (specific to the 2-state model), the same as was used in inference procedure described in the manuscript. - Run simulations corresponding to a fixed number of samples of perturbed parameters obtained from the nominal parameters using the noise function. - Optional output to files of perturbed parameter vectors and final states and simulation times. - A benchmarking script that runs the above simulations. - Run benchmark with output to files and compare to see if Gillespie and Psampler produce similar results. - Run benchmark with minimal output to files so as not to conflate simulation time and I/O time.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.