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aebs

aebs-db

aebs-db-utils

atmodel_stackexchange

Trying to apply the author-topic model on a StackExchange datatump (https://archive.org/details/stackexchange)

bioconda-recipes

Conda recipes for the bioconda channel.

conda_test1

demuxlink

Demultiplex/basecall linked-read data from 10x Genomics using bcl2fastq.

distributed_nmf

docker-longranger

fargen-1-exome

fargen-db-utils

fargen-db-webui

fargen-user-docker

Ubuntu image for bioinformatics on the FarGen cluster.

gensim

Topic Modelling for Humans

hydejack-starter-kit

igv-webapp-docker

ldasimple

Naive VB implementation of LDA I'm making as an exercise.

linkedsim

linkseq_testdata

Simulated linked-read data for the exolink pipeline

lrsim-docker

Docker build of LRSIM (https://github.com/aquaskyline/LRSIM).

mf9155_env

Conda environment for course MF9155 at UiO.

olavurmortensen.github.io

pedgraph

rnaseq-demo

For a tutorial at https://github.com/nextflow-io/crg-course-nov16

rnn_project

This repository contains code that I use for a project in RNNs that I'm doing at DTU.

scikit-allel

A Python package for exploring and analysing genetic variation data

simplemotordriver

sqlitedict

Persistent dict, backed by sqlite3 and pickle, multithread-safe.

subdomains

A Hapijs plugin to extract subdomains in a url

test_container