intuitive search about g2p-aggregator HOT 13 CLOSED

@ahwagner Please review - I'll make a public instance available for review, hopefully by 2/4

Proposed changes

Refactored search

Default operator now and was or

Current

Proposed

Refactored table

Current

Proposed

from g2p-aggregator.

@bwalsh proposed changes look good to me.

from g2p-aggregator.

Some additional changes we should implement:

• ensure source_url field URLs are presented as hyperlinks
  
• point the help documentation hyperlink in the intro paragraph to docs.cancervariants.org.
• add brca to the list of excluded sources on the paper filter
• fix auto-sort on evidence level
• reduce filter drop-down menu options to preferentially sort or only display "short labels"

from g2p-aggregator.

@bwalsh added some feedback from our call today to this issue.

from g2p-aggregator.

@ahwagner

I've updated the staging site at 35.165.177.191.
The items checked off above have been addressed.
A new bucket with the data is available at https://s3-us-west-2.amazonaws.com/g2p-0.12/index.html
The drop-down menu options cannot be shortened. However, I have ensured that a filtered short lable eg evidence_lable does filter the results.

Let me know your thoughts

from g2p-aggregator.

These changes all look good. It appears that the "response" column broke, however; even records containing response_type data lack content in the relabeled column.

from g2p-aggregator.

@bwalsh did you have a chance to look at comment above?

from g2p-aggregator.

from g2p-aggregator.

Okay. I'm getting a weird error on my end–it looks like many of the columns are now broken, as is one of the interactive heatmaps.

from g2p-aggregator.

from g2p-aggregator.

Fantastic. I'm going to bump this to production for co-author review, with the caveat that the Table 2 p. normalization (this issue) isn't yet completed.

from g2p-aggregator.

Requests for JSON data from https://s3-us-west-2.amazonaws.com/g2p-0.12/index.html (e.g. https://s3-us-west-2.amazonaws.com/g2p-0.12/civic.json) return Access Denied errors. @bwalsh could you take a look at this?

from g2p-aggregator.

@ahwagner fixed. thanks for the catch

from g2p-aggregator.