Comments (4)
nunofonseca
commented on September 26, 2024
Hi!
Thanks for reporting the issue. Two initial questions to try to pinpoint the cause of the problem.
i) what is the version of iRAP that you are using?
ii) What is the Linux distribution and version were you are running iRAP?
Cheers.
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jodyphelan
commented on September 26, 2024
I am running Ubuntu 14.04.5 LTS. With iRAP version 0.8.5.
It is the first time I am running it.
Thanks!
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nunofonseca
commented on September 26, 2024
Thanks. I think that the issue you reported has been fixed. Could you please update iRAP to the latest version and try again?
Cheers.
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jodyphelan
commented on September 26, 2024
I've updated and it is working now. Thanks
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Related Issues (20)
- aux/R/irap_de.R::process.cmdline.args mis-casts --min (opt$min_count) as a string, should be integer HOT 1
- sample name do not match
- fastq_pre_barcodes.c:34:17: fatal error: bam.h: No such file or directory
- Downloads to a submodule?
- iRAP pipeline for EMBL-EBI Expression Atlas HOT 1
- Configuration file for strand specific protocol
- mapper options in config file is ignored HOT 3
- irap_raw2metric no html file, not gzipped HOT 7
- our_prefix error when analysis name is same as the raw read file name without suffix HOT 2
- failed to load GTF file HOT 3
- RSEM strandness HOT 12
- TPM values rounded to 2 decimals HOT 3
- Docker link in wiki is wrong HOT 1
- Error running Docker image HOT 2
- iRAP's Kallisto call seems to provide read length at fragment size parameter HOT 1
- sh: 1: set: Illegal option -o pipefail error in "irap_gtf_to_fasta". HOT 4
- iRAP does not recognise stage0 completion for large genomes with HISAT2 HOT 5
- docker image for v1.0.1 HOT 2
- docker image 1.0.1 not working HOT 1
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