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Nitesh Kumar NKM's Projects

analysis icon analysis

Trajectory analysis tool for Tinker & Gromacs & Amber

anncolvar icon anncolvar

Collective variables by artificial neural networks

asph-code icon asph-code

data and code to reduplicate paper: Topological representations of crystalline compounds for the machine-learning prediction of materials properties

biopycourse icon biopycourse

Python short course for graduates in biology and biochemistry

book icon book

This book serves as an introduction to a whole new way of thinking systematically about geographic data, using geographical analysis and computation to unlock new insights hidden within data.

bootstrapped icon bootstrapped

Generate bootstrapped confidence intervals for A/B testing in Python.

cavity-volumes-pbc icon cavity-volumes-pbc

Voronoi-based calculation of cavities inside molecular dynamics models with periodic boundary conditions

cgnet icon cgnet

learning coarse-grained force fields

chemlab icon chemlab

The chemistry library you were waiting for

chm579 icon chm579

This is the course GitHub page for CHM 579 at Purdue University

clayff icon clayff

A GROMACS implementation of the ClayFF force field

clustersam icon clustersam

Fast estimation of ion-pairing for screening battery electrolytes

communities icon communities

Library of community detection algorithms and visualization tools

conda icon conda

Repository with conda recipes for LAMMPS, GROMACS, etc (WIP)

covid-19-community icon covid-19-community

Community effort to build a Neo4j Knowledge Graph (KG) that links heterogeneous data about COVID-19

cp2k-1 icon cp2k-1

Quantum chemistry and solid state physics software package

cp2k-input-tools icon cp2k-input-tools

Fully validating pure-python CP2K input file tools including preprocessing capabilities

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