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nickengland's Projects

bracer icon bracer

BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data

cell2location icon cell2location

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

cwltool icon cwltool

Common Workflow Language reference implementation

cyvcf2 icon cyvcf2

cython + htslib == fast VCF and BCF processing

drake icon drake

Data workflow tool, like a "Make for data"

igor icon igor

IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data.

jobson icon jobson

A platform for transforming command-line applications into a job service.

openvirus icon openvirus

aggregation of scholarly publications and extracted knowledge on viruses and epidemics.

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