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Nicholas Brazeau 's Projects

2016 icon 2016

Advanced Epidemiologic Methods -- 2016

bactopia icon bactopia

A flexible pipeline for complete analysis of bacterial genomes

bobfunctions2 icon bobfunctions2

A bunch of useful functions that make everyday coding easier.

discent icon discent

Gradient descent for estimating inbreeding spatial coefficients from pairwise-IBD estimates

goodegg icon goodegg

Package developing framework and helper

hmmertime icon hmmertime

Infer blocks of identity by descent between samples from unphased haplotype data using an HMM

icer icon icer

Infection composition estimation in R

jppsiterweight icon jppsiterweight

Using the JPPS Parametric Curve for Iterative Reweighted Nonlinear Estimation

mlrwrapsl icon mlrwrapsl

A simple wrapper of the SL algorithm using MLR toolbase

nfbteach icon nfbteach

Collection of previous teaching materials

nfbtools icon nfbtools

Depreciated in favor of @IDEELResearch and modularity. Here for posterity and interest

polysimibd icon polysimibd

Structured Wright Fisher Model for Malaria Population Genetic Simulations

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