Comments (2)
@DylanWelzel for the repository-level metadata completeness score calculations, can you add some additional scores? Do not remove the other scores as the NIAID team is interested in using them for analysis, but they do not want those scores displayed by the UI. Instead, the repository-level scores to be displayed by the UI are:
- A percentage of the number of fundamental metadata fields that are present relative to the total number of fundamental fields
- If a fundamental field was successfully mapped to a field in the repository, it should be included in the calculation for the
binary_required_score
, regardless of how well that field is actually covered in that repository. - If a fundamental field has no equivalent in the repository field list, but we augment the field; our augmentation does NOT count towards the
binary_required_score
, but instead counts towards abinary_required_augmented
- If a fundamental field is successfully mapped to a field int he repository, and we also augment it for the repository, it will count towards the
binary_required_score
and thebinary_required_augmented
- If a fundamental field was successfully mapped to a field in the repository, it should be included in the calculation for the
- A percentage of the number of recommended metadata fields that are present relative to the total number of recommended fields
- If a recommended field was successfully mapped to a field in the repository, it should be included in the calculation for the
binary_recommended_score
, regardless of how well that field is actually covered in that repository. - If a recommended field has no equivalent in the repository field list, but we augment the field; our augmentation does NOT count towards the
binary_recommended_score
, and instead counts towards abinary_recommended_augmented
- If a fundamental field is successfully mapped to a field in the repository, and we also augment it, it will count towards the
binary_recommended_score
and thebinary_recommended_augmented
- If a recommended field was successfully mapped to a field in the repository, it should be included in the calculation for the
from nde-crawlers.
Marking this issue as pending close out
since these badges are now on production. I'll close it after a week if there are no further changes to be made
from nde-crawlers.
Related Issues (20)
- [Source]: Malaria Genomic Epidemiology Network (MalariaGEN) HOT 6
- [Source]: Mass Spectrometry Interactive Virtual Environment (MassIVE) HOT 9
- [Source]: BioStudies ArrayExpress HOT 1
- [Source]: High Priority Resource Catalogs HOT 7
- [Source]: NIAID Medium priority Resource Catalogs HOT 4
- [Parser Fix]: Investigate propagation of missing SRA metadata from Experiment-level records HOT 4
- [Parser Fix]: BD2K LINCS DCIC changes requested by NIAID team HOT 1
- [Metadata Improvement]: Apply funding helper consistently HOT 1
- [Source]: COVID RADx Data Hub
- [Source]: Database of Genotypes and Phenotypes (dbGaP)
- [Source]: The Network Data Exchange (NDEx) HOT 2
- [Metadata Improvement]: GPT topicCategory hallucinations HOT 2
- [Metadata Improvement]: Figshare filtration strategy HOT 8
- [Metadata Improvement]: Standardize MeasTech Metadata for Sources with existing Regular/Semiregular values
- [Metadata Improvement]: MassIVE character encoding issue
- [Metadata Improvement]: Generate abstracts to improve the display of descriptions
- [Metadata Improvement]: Standardize and augment keywords
- [Metadata Improvement]: Address duplication between DDE and other sources
- [Parser Fix]: Add missing funding and license information from Mendeley
- [Mapping Change]: bio.tools mapping improvement
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from nde-crawlers.