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bpsc

Beta-Poisson model for single-cell RNA-seq data analyses

circall

Circall is a novel method to discover circular RNA from paired-end RNA sequencing data

circnetvis

CircNetVis: an interactive web application for visualizing interaction networks of circular RNAs

fuseq

fuseq_wes

isop

Isoform-level expression patterns in single-cell RNA-sequencing data

jellyfish

A fast multi-threaded k-mer counter

jemalloc

libgff

A simple GFF/GTF parsing library in C++

mascotparser

A parser for Mascot search results ( both PMF and MSMS) in R package.

max

Quantification of mutant-allele expression at isoform level

rapmap

Rapid sensitive and accurate read mapping via quasi-mapping

sailfish

Rapid Mapping-based Isoform Quantification from RNA-Seq Reads

scasa

SCASA: Single cell transcript quantification tool

scmut

scrnaseq-de-comparison

Real and simulated single-cell RNA-seq datasets for differential expression analysis

secircrnaevaluation

This is the online repository for Evaluation of circRNA detection tools on SE Sequencing data project

sparsehash

Automatically exported from code.google.com/p/sparsehash

speaq

A suite of informatics tools for the quantitative analysis of NMR metabolomic profile data

speaq2