Comments (4)
Is the pipeline name following the lowercase convention an absolute requirement?
from tools.
This becomes less important with new nf-core create
name validation in #175 (but could still be nice and should be easy)
from tools.
Is the pipeline name following the lowercase convention an absolute requirement?
Up for discussion - the reason for this was that docker images are always lower case and without punctuation, so makes everything more consistent. Also just easier to remember if everything is always lower case.
NB: I remember way back thinking that the lint tool could be useful for people doing pipelines outside of nf-core (eg. forks). This test could be annoying there, so maybe good as a warning instead of a fail?
from tools.
Yes, I think a warning is already sufficient, giving people feedback instead of just failing is better in such a case 👍
from tools.
Related Issues (20)
- Move --migrate-pytest command to `module test` command group HOT 2
- Add process_high_memory to create/lint list HOT 1
- Manual include or exclude specific files in template
- Linting throws an error if hyphens appear in the name HOT 5
- `xx` is present as an output in meta.yml but not in main.nf HOT 1
- Test pipelines with Singularity & Conda
- Print test directory path in output from `nf-core test`
- modules linting: Check that version.yml has version of all items in `environment.yml`
- `nf-core sync` does not respect existing template config on dev branch
- MultiQC results not cacheable
- nf-core/tools download error HOT 5
- Lint for test data paths and produce a warning/error if the config map is used?
- Add `-w`, `--fail-warned` option to `nf-core schema lint`
- Move igenomes config into pipeline code HOT 2
- Remove try-catch blocks around institutional configs HOT 14
- Add a linting test for the metro map
- Pass a list of modules/subworkflows(files) to nf-core modules lint
- Release PR (dev to master) does not fail with a pipeline still on dev version
- Schema: Support multi-line text inputs HOT 1
- what is 'getGenomeAttribute' and how can we use igenomes without it? HOT 10
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