Comments (2)
Need to validate that #113 is prevented
from nascent.
Hi @emiller88!
Ran into the same issue.
The nf-core also discusses this issue with the solution here for now:
https://github.com/nf-core/chipseq/issues/313
Turns out the naming convention in the sample sheet is throwing issues midway in the pipeline at samtools sort after UMI deduplication. Can we please try to catch this at the check_samplesheet.py level in this fix?
from nascent.
Related Issues (20)
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from nascent.