Related Issues (20)
- Add pharokka to nf-core/modules
- Add nf-tests to nf-core/modules bacphlip
- [FEATURE] remove params.monochrome_logs from UTILS_NFCORE_PIPELINE HOT 1
- new module: krakentools/extract_kraken_reads
- new submodule: salmon quantmerge
- new module: openms/idripper
- new module: openms/idscoreswitcher
- new module: openms/peptideindexer
- new module: resfinder/run
- new module: agat/spaddintrons
- new module: Somatosim - simulate mutations in a bam file HOT 1
- new subworkflow: BAM/MARKDUP/SAMBAMBA HOT 1
- Add nf-tests to nf-core/modules genomad
- [FEATURE] Clearer documentation in on writing `nf-test` tests with multiple input channels
- Add nf-tests to nf-core/modules mash
- new module: repeatmodeler/builddatabase
- new module: repeatmodeler/repeatmodeler
- gtdbtk/classifywf: Missing double quote in find command
- new module: openmsthirdparty/cometadapter
- Check out if we really can remove these old tests in custom/sratoolsncbisettings
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