Comments (4)
drpatelh
commented on June 10, 2024
1
Yep, it will affect any pipelines that are using a native Groovy process with executor 'local' and exec. I have fixed this in nf-core/rnaseq v3.11.1 already by removing these processes. We need to do the same for this pipeline.
We are tracking the issue internally at the moment but will keep you updated when we push a fix.
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drpatelh
commented on June 10, 2024
1
This should be fixed now in NF v23.04.1 via nextflow-io/nextflow@6ea1f68
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drpatelh
commented on June 10, 2024
Thanks for reporting and suggesting a fix. This is a known issue with the latest stable NF release.
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pinin4fjords
commented on June 10, 2024
Thanks @drpatelh. We're getting it on rnaseq as well- is there already an issue open on Nextflow somewhere to track resolution? I can't find one right now.
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