Related Issues (20)
- Add shiny app generation
- Shiny app generation doesn't work for arrays HOT 1
- Differential splicing analysis using rMATS HOT 1
- Skip outlier detection with low replication
- input samplesheet template for affimetrix data HOT 5
- Document sample sheet for Affy arrays
- Proxy-Setting/Prevent R from Internet Search HOT 4
- Download fails with singularity errors
- [Bug] Can't pass samplesheet with -c file.config , or -params-file params.yml or directly with --input samplesheet.csv
- Sample exclusion options fail due to contrast-wise normalisation
- Bad job name on LSF (too long, special chars?)
- workaround OPENBLAS using all cores problem
- Error with DESEQ2_DIFFERENTIAL when using spike-in controls: Not a valid path value type: org.codehaus.groovy.runtime.NullObject (null)
- Add link to example Shiny app
- Getting "Error in data[[rowvar]] : attempt to select less than one element in get1index" when using transcript_counts from rnaseq pipeline
- Error about r-shinyngs:1.7.1--r42hdfd78af_1 when used nf-core download with singularity
- Error about r-shinyngs:1.7.1--r42hdfd78af_1 when used nf-core download with singularity HOT 2
- GSEA_GSEA error:: Missing output file(s) `*butterfly_plot.png`? HOT 6
- Duplicated "using" word
- add apeglm log fold change shrinkage HOT 2
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