Comments (6)
You have to change all the "Soma 1" to "Soma". The only allowed names in
nrn/share/lib/hoc/import3d/read_nlcd3.hoc are:
if (strcmp(current.s, "CellBody") == 0) { keep = 1 }
if (strcmp(current.s, "Cell Body") == 0) { keep = 1 }
if (strcmp(current.s, "Soma") == 0) { keep = 1 }
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Ok thanks,
But what about the GUID problem, shouldn't the loader just ignore it?
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Yes. I believe it would make sense to generate a "Do not understand '...', Ignoring." message (only once
per file) which you would not see if the quiet option was set.
from nrn.
Hi, I also have a similar problem with (GUID "")
in .asc morphology files.
@nrnhines would it be possible to get it fixed as you suggested? Thanks in advance for the support.
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That is fixed by the latest commit 0993b3e
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Thanks @nrnhines. I've recompiled NEURON from the git repository code and it works with my morphology.
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Related Issues (20)
- Allow trivial changes without running CI. HOT 3
- Improve installation tests. HOT 1
- Update Release Documentation after 8.2.4
- Missing dependency between `nocpout.cpp` and `${mod}.cpp`. HOT 1
- Outdated `cfiles` in `nrnivmodl`. HOT 4
- Mechanism Loading Issues: nrn_dll_loaded does not update and Segfaults
- Typo for windows download url at https://nrn.readthedocs.io/en/8.2.4/ HOT 3
- Remove usage of deprecated `pkg_resources` HOT 2
- An Option to Disable Automatic Loading of Mechanisms on Import
- In coreneuron.py : getters of some attributes don't work.
- Python contributing instructions are out of date
- Error with master / upcoming v9.0: "generic_data_handle{raw=..type=void*} cannot be converted to data_handle<double>"
- Higher simulation time in NEURON 9 compared to NEURON 8.2.4 HOT 15
- Investigate memory usage increase with GPU CI
- FractionalVolume with surface_fraction=0 does not work for 3d Region HOT 2
- `import neuron` modifies the `help` pager
- Remove references to AoS layout in CoreNEURON.
- CI: share/lib/python/neuron/tests/ are not included in coverage
- Multiprocessing behavior differs across Ubuntu/MacOS HOT 9
- NEURON no longer visible to pip in 8.2.4+ in Windows HOT 4
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