Comments (8)
andreas-h
commented on September 9, 2024
3
Okay, I managed to make the installation work. I had to add
"allowSyntheticDefaultImports": true
to tsconfig.json in the compilerOptions section.
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wl2776
commented on September 9, 2024
2
I've got corrupted jupyterlab after installation.
Restarting server and kernels did not help.
I've resolved this issue with reinstallation of jupyterlab (conda install --force-reinstall jupyterlab). However, jupyterlab-slurm extension has disappeared after this.
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krinsman
commented on September 9, 2024
Are you installing this from source or from the PyPI+NPM repositories? The published packages are outdated, so for now if you want to use this with JupyterLab 1.0+, you will need to install it from source. (See e.g. the discussion here.)
Run in the terminal:
git clone https://github.com/NERSC/jupyterlab-slurm.git
cd jupyterlab-slurm
pip install .
jupyter serverextension enable --sys-prefix jupyterlab_slurm
jlpm install
jlpm run build
jupyter labextension install
@andreas-h Let me know if that helped so we can know whether to close this issue or not.
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andreas-h
commented on September 9, 2024
Thanks, @krinsman. The pip part seems to work fine, but in jlpm I'm getting warnings and an error:
$ jlpm install
yarn install v1.15.2
info No lockfile found.
[1/4] Resolving packages...
[2/4] Fetching packages...
[3/4] Linking dependencies...
warning "@jupyterlab/application > @jupyterlab/[email protected]" has unmet peer dependency "react@~16.8.4".
warning "@jupyterlab/application > @jupyterlab/ui-components > @blueprintjs/[email protected]" has unmet peer dependency "react-dom@^15.3.0 || 16".
warning "@jupyterlab/application > @jupyterlab/ui-components > @blueprintjs/core > [email protected]" has unmet peer dependency "react-dom@>=15.0.0".
warning "@jupyterlab/application > @jupyterlab/ui-components > @blueprintjs/[email protected]" has unmet peer dependency "react-dom@^15.3.0 || 16".
[4/4] Building fresh packages...
success Saved lockfile.
warning Your current version of Yarn is out of date. The latest version is "1.17.3", while you're on "1.15.2".
Done in 32.05s.
$ jlpm run build
yarn run v1.15.2
$ tsc
node_modules/@jupyterlab/ui-components/lib/icon/iconregistry.d.ts:1:8 - error TS1192: Module '"/home/jupyter/src/jupyterlab-slurm/node_modules/@types/react/index"' has no default export
.
1 import React from 'react';
~~~~~
node_modules/@jupyterlab/ui-components/lib/icon/interfaces.d.ts:3:8 - error TS1192: Module '"/home/jupyter/src/jupyterlab-slurm/node_modules/@types/react/index"' has no default export.
3 import React from 'react';
~~~~~
error Command failed with exit code 1.
info Visit https://yarnpkg.com/en/docs/cli/run for documentation about this command.
I'm in a conda environment.
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krinsman
commented on September 9, 2024
@andreas-h That seems like a good fix for the problem. Based on the error I'm not sure whether that is a problem on our side, JupyterLab's side, or React's side. @tslaton Do you know how to diagnose this? Should we use a more specific import statement from the JupyterLab modules?
Anyway I will upload that bug fix now.
I think using npm sometimes leads to things working out better than using Yarn (which is what jlpm) but I don't really know and am actually somewhat grasping at straws here.
EDIT: OK allowSyntheticDefaultImports is now true in the master branch of JupyterLab Slurm.
Thank you @andreas-h for catching this and letting us know what the fix is!
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krinsman
commented on September 9, 2024
@wl2776 This is obviously not good. Are you using the newest version of JupyterLab (or at least the JupyterLab package from Conda Forge)?
I am not sure right now what the fix is but it is obviously a breaking issue, thank you for bring it to our attention @wl2776!
Maybe can you post the output of conda list so we can compare environments? What operating system are you running on? (See here for formatting collapsible things)
conda list
# Name Version Build Channel
appnope 0.1.0 py37_1000 conda-forge
attrs 19.1.0 py_0 conda-forge
backcall 0.1.0 py_0 conda-forge
bleach 3.1.0 py_0 conda-forge
bzip2 1.0.8 h01d97ff_1 conda-forge
ca-certificates 2019.6.16 hecc5488_0 conda-forge
certifi 2019.6.16 py37_1 conda-forge
decorator 4.4.0 py_0 conda-forge
defusedxml 0.5.0 py_1 conda-forge
elasticsearch 7.0.2 pypi_0 pypi
entrypoints 0.3 py37_1000 conda-forge
invoke 1.2.0 py37_1000 conda-forge
ipykernel 5.1.2 py37h5ca1d4c_0 conda-forge
ipython 7.8.0 py37h5ca1d4c_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
jedi 0.15.1 py37_0 conda-forge
jinja2 2.10.1 py_0 conda-forge
json5 0.8.5 py_0 conda-forge
jsonschema 3.0.2 py37_0 conda-forge
jupyter_client 5.3.1 py_0 conda-forge
jupyter_core 4.4.0 py_0 conda-forge
jupyterlab 1.1.3 py_0 conda-forge
jupyterlab_server 1.0.6 py_0 conda-forge
libcxx 8.0.1 0 conda-forge
libcxxabi 8.0.1 0 conda-forge
libffi 3.2.1 h6de7cb9_1006 conda-forge
libsodium 1.0.17 h01d97ff_0 conda-forge
markdown 3.1.1 pypi_0 pypi
markupsafe 1.1.1 py37h1de35cc_0 conda-forge
mistune 0.8.4 py37h1de35cc_1000 conda-forge
nbconvert 5.6.0 py37_1 conda-forge
nbformat 4.4.0 py_1 conda-forge
nbresuse 0.3.1 pypi_0 pypi
ncurses 6.1 h0a44026_1002 conda-forge
newrelic 4.20.1.121 pypi_0 pypi
nodejs 11.14.0 h6de7cb9_1 conda-forge
notebook 6.0.1 py37_0 conda-forge
openssl 1.1.1c h01d97ff_0 conda-forge
pandoc 2.7.3 0 conda-forge
pandocfilters 1.4.2 py_1 conda-forge
parso 0.5.1 py_0 conda-forge
pexpect 4.7.0 py37_0 conda-forge
pickleshare 0.7.5 py37_1000 conda-forge
pip 19.2.3 py37_0 conda-forge
prometheus_client 0.7.1 py_0 conda-forge
prompt_toolkit 2.0.9 py_0 conda-forge
psutil 5.6.2 py37h01d97ff_0 conda-forge
ptyprocess 0.6.0 py_1001 conda-forge
pycurl 7.43.0.3 pypi_0 pypi
pygments 2.4.2 py_0 conda-forge
pylibmc 1.6.0 pypi_0 pypi
pyrsistent 0.15.4 py37h01d97ff_0 conda-forge
python 3.7.3 h93065d6_1 conda-forge
python-dateutil 2.8.0 py_0 conda-forge
pyzmq 18.0.2 py37hee98d25_2 conda-forge
readline 8.0 hcfe32e1_0 conda-forge
send2trash 1.5.0 py_0 conda-forge
setuptools 41.2.0 py37_0 conda-forge
six 1.12.0 py37_1000 conda-forge
sqlite 3.29.0 hb7d70f7_1 conda-forge
statsd 3.3.0 pypi_0 pypi
terminado 0.8.2 py37_0 conda-forge
testpath 0.4.2 py_1001 conda-forge
tk 8.6.9 h2573ce8_1002 conda-forge
tornado 5.1.1 pypi_0 pypi
traitlets 4.3.2 py37_1000 conda-forge
urllib3 1.25.3 pypi_0 pypi
wcwidth 0.1.7 py_1 conda-forge
webencodings 0.5.1 py_1 conda-forge
wheel 0.33.6 py37_0 conda-forge
xz 5.2.4 h1de35cc_1001 conda-forge
zeromq 4.3.2 h6de7cb9_2 conda-forge
zlib 1.2.11 h01d97ff_1006 conda-forge
@tslaton This looks exactly like the error we say with JupyterLab-cpustatus, right? Are we sure this is a bug we can fix on our side, or do you think we should open an issue with JupyterLab?
It seems suspicious that the same error would happen independently in two different extensions written in two very different ways if there was no problem with breaking changes to JupyterLab extension API.
I'm not able to reproduce the error on this machine with JupyterLab Slurm, but I got the same error with JupyterLab-cpustatus on Friday on a different machine. I'm not sure what to do about this.
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krinsman
commented on September 9, 2024
@wl2776 I made this a separate issue, see: #32
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krinsman
commented on September 9, 2024
@andreas-h I'll close this for now, since you said the fix you proposed worked for you, it seemed to work for me too, and the fix has now been pushed to master. Please request that it be reopened if it hasn't actually been fixed yet.
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