nathaniel-mahieu Goto Github PK
Name: Nathaniel G. Mahieu
Type: User
Bio: Metabolomics, Chemoproteomics, Data
Location: boston
Name: Nathaniel G. Mahieu
Type: User
Bio: Metabolomics, Chemoproteomics, Data
Location: boston
Bitcoin Core integration/staging tree
A fork of centWave - LC/MS peak detection with wavelets.
Code I'm working on and sharing with people.
Allows the use of multiple, interleaved, scan segments with Compound Discoverer
:exclamation: This is a read-only mirror of the CRAN R package repository. cplexAPI — R Interface to C API of IBM ILOG CPLEX
Arduino Library and Example code for using the Cthulhu Shield
R/foreach Redis backend for parallel computing
Proof of concept untargeted enrichment detection
Plotting Assignment 1 for Exploratory Data Analysis
Intuitive NA-handling in R
Project for coursera class
Turns Kiss Cartoon Into VLC Playlists
Macha is an unpublished suite of tools for metabolomics analysis. This includes novel algorithms for ROI detection for orbitrap data (webroi), baseline estimation for orbitrap data (ahull.baseline) and peak model estimation using skewed gaussian distributions (findcomponenets), fast peak grouping (dengroup and kernelsplit), and wrappers for warpgroup and mz.unity (warpgroup.nmacha unityme). Originally intended to improve on the result quality of existing metabolomic workflows. Ultimately I came to see the chromatographic-peak driven model of processing MS data as flawed and lost interest in this project. Some of the code remains useful.
Random scripts regarding metabolomics
mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
Nextflow library version management with renv and docker. Also distributing custom code to nextflow nodes.
Targeted. DTW. Isotopologues.
Analysis of QE signal oscillation
Peer Assessment 1 for Reproducible Research
The warpgroup algorithm takes multiple LC/MS samples and determines: 1. Segregation of those peaks into compound groups; 2. Per-group consensus integration bounds; 3. Integration bounds for samples in which no peak was detected.
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.