Name: Noah Siegel
Type: User
Company: https://lmillerlab.faculty.ucdavis.edu/
Bio: I am a grad student studying how the disruption of the airway microbiome early in life can lead to developmental deficiencies in the neonatal lung.
Twitter: nasiegel8
Location: UC Davis
Blog: http://nasiegel88.github.io
Noah Siegel's Projects
General snakemake pipeline to generate cell matrices for single-cell analysis and .loom files to assess cell development
Dissertation writing for PhD at UC Davis
Single-cell analysis on control animals from Esaulova et al., 2021 Cell Host Microbe
My notes from the 2021 UC Davis Metagenomics and Metatranscriptomics workshop
Calculations for 16S amplicon peak concentrations
Lecture material from genomics, winter 2020
Script to install multiple versions of R for Rstudio server
My professional documents
Pipeline to run qiime2 with snakemake