Comments (1)
mpoelchau
commented on September 26, 2024
@trentwyman here is a blast results page where the correct sseqid is listed - let's use the example XP_049805619.1: https://i5k.nal.usda.gov/webapp/blast/task/c89c13c507d64a91a85f5dec4d18e4ea
Screenshot with the example sseqid highlighted:
Here is the Apollo URL that would need to be generated from the example sseqid XP_049805619.1 and organism Schistocerca_nitens: https://apollo.nal.usda.gov/apollo/Schistocerca_nitens/jbrowse/index.html?loc=XP_049805619.1
from genomics-workspace.
Related Issues (20)
- Re-written [BLAST query page] by React JS library HOT 5
- [BLAST query page] Organism display order HOT 1
- Final step to Integrate the adding organism functionality to CWL and fix CI issue HOT 3
- All feature under manage.py command HOT 3
- Do we need the sequences table? HOT 1
- Adding delete feature to script HOT 2
- Test if linkouts appear when ENABLE_JBROWSE_INTEGRATION = False HOT 1
- add CLI function to set is_shown HOT 3
- The blast_sequence table is big and only getting bigger HOT 10
- Moving docker version to the new repo
- vulnerabilities of django 1.11.20 and update blastdbcmd argument HOT 3
- Update readthedocs with command line interface documentation
- Consider truncating BLAST results when they are too large
- manage.py addOrganism capitalizes the short_name entry
- Using dbtitle in blast-results.js is awkward
- disable travis CI HOT 1
- Problems with multiple space characters in organism name
- google analytics code is missing
- change draggableBlastFeature to draggableNeatBlastFeature HOT 1
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