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applied-computational-genomics

Applied Computational Genomics Course at UU: Spring 2020

bioinfo-notebook

🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics-books

"Every single cell in the human body replaces itself over a period of seven years. That means there's not even the smallest part of you now that was part of you seven years ago." ― Steven Hall

bioinformatics-guide

Bioinformatics Guide

boss22

Bioinformatics Hub of Kenya Conference, 26-29 April 2022

busia-2022

Busia work

combining-plots

Combining plots

drugchat

DrugChat: Towards Enabling ChatGPT-Like Capabilities on Drug Molecule Graphs

line-graph-plotting-in-r

Tajima D values

liquidbrain_scripts

This folder ultimately should contains all my project shown in my Youtube channel.

microbiomebestpracticereview

Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing

ml4bio

A graphical interface for sklearn classification to introduce machine learning to biologists

ml4bio-workshop

Materials for a workshop introducing machine learning to biologists

moimix

R package for inferring multiple infections from high-throughput sequencing data

mount-kenya-university-bioinformatics-workshop-2022

A repository with data, scripts and results of the 1st Bioinformatics MKU workshop

nextflow

A DSL for data-driven computational pipelines

nf-hello

Nextflow plugin implementation skeleton

nf-nomad

[WIP] Hashicorp Nomad executor plugin for Nextflow

nf-parquet

Plugin implementing the support for Apache Parquet files (experimental)

nf-validation

Params validation plugin for Nextflow pipelines

nf-wave

Wave provisioning containers plugin for Nextflow

pasteur-canteen-desserts

A Survey of Canteen Desserts at Institut Pasteur

pcaexplorer

pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data

pd_assemb

pfcsp-r-diagrams

plugins

Nextflow plugins index repository

popart

General purpose population genetics software

popart-current

pycircos

python Circos