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Comments (9)

wangy2014 avatar wangy2014 commented on July 19, 2024

The error message indicates that the input potential or the structure data is problematic. Which tutorial example shows the problem? Thanks!

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vishnu2709 avatar vishnu2709 commented on July 19, 2024

Could you also let us know what system you are working on, and what was the run command you used (mpirun .....)?

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cwhaddon avatar cwhaddon commented on July 19, 2024

I've tried this on Ubuntu 22.04, GNU Guix System, and using the Nix package manager and get the same results on each. I'm compiling with GCC and OpenMPI.

The command I'm running looks like this.

[nix-shell:~/downloads/MuST/Tutorials/CuZn/BCC]$ mpirun -np 1 ../../../bin/mst2 < i_new

I get the same error for each CuZn example.

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wangy2014 avatar wangy2014 commented on July 19, 2024

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wangy2014 avatar wangy2014 commented on July 19, 2024

We have not found any issue with running GCC+openMPI. Which version of GCC are you using?

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liangstein avatar liangstein commented on July 19, 2024

I've tried this on Ubuntu 22.04, GNU Guix System, and using the Nix package manager and get the same results on each. I'm compiling with GCC and OpenMPI.

The command I'm running looks like this.

[nix-shell:~/downloads/MuST/Tutorials/CuZn/BCC]$ mpirun -np 1 ../../../bin/mst2 < i_new

I get the same error for each CuZn example.

Hello, alternatively you can use our docker image "docker pull liangstein/must:secondversion". Use the user "must" in the image, and I tested all the tutorials are fine.

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cwhaddon avatar cwhaddon commented on July 19, 2024

I am using GCC 12.3.0

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liangstein avatar liangstein commented on July 19, 2024

I am using GCC 12.3.0

Hello, it's better to use the GCC version lower than 10. You can install one GCC manually or just using the docker image provided.

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cwhaddon avatar cwhaddon commented on July 19, 2024

Thank you, that seems to work.

In a nix shell with gcc9 and gfortran9, setting the environment variables OMPI_CC=gcc OMPI_CXX=g++ OMPI_FC=gfortran, and adding -DNoXDR_format to CFLAGS I can get mst2 to compile and successfully run.

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