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Matthew Weber's Projects

bashwes_cancer_varcall icon bashwes_cancer_varcall

Bash-glued variant calling workflow optimized for cancer whole-exome sequencing data on Blue Waters

cpsc_499_r_class icon cpsc_499_r_class

This is a repository for R code regarding assignments and practice from CPSC 499.

eks-app-mesh-polyglot-demo icon eks-app-mesh-polyglot-demo

End to end deployment and observability of polyglot microservices in Amazon EKS using AWS App Mesh, AWS Fargate, Amazon Cloudwatch Container Insights, and AWS X-Ray

grasp icon grasp

Gamified Rheumatoid Arthritis Standardized Platform

groupme-bot icon groupme-bot

A bot for the GroupMe messaging service (https://dev.groupme.com/tutorials/bots)

parsevcfs icon parsevcfs

This is the repository for the development of an R package created for a final project in CPSC 499. The purpose is to parse and process VCF files in batch to produce useful output for downstream analysis.

srt icon srt

Secure, Reliable, Transport

triviago icon triviago

Code to create an Alexa Skill to pull bar trivia information from Twitter.

usefulrcode icon usefulrcode

This repository stores an R package of helpful R code

varanalysis icon varanalysis

Variant analysis tools, primarily for annotating and parsing through VCFs/ANNOVAR output.

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