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Matthew Parker's Projects

bookdown_with_cross_references icon bookdown_with_cross_references

Example of a minimal bookdown project with multiple chapters files, figure and table references. Used yihui's minimal_bookdown project as a starting point.

covid-diseasemodel2021 icon covid-diseasemodel2021

R codes for model fitting using the disease analytics model from Parker, M.R.P., Li, Y., Elliott, L.T., Ma, J., Cowen, L.L.E (2021). Under-reporting of COVID-19 in the Northern Health Authority region of British Columbia. Canadian Journal of Statistics [https://doi.org/10.1002/cjs.11664].

covid-multisitemodel2022 icon covid-multisitemodel2022

R codes for model fitting using the multi-site disease analytics model from Parker, M.R.P., Cao, J., Cowen, L.L.E, Elliott, L.T., Ma, J. (2022). Multi-site disease analytics with applications to estimating COVID-19 undetected cases in Canada. [Preprint]

dowhile icon dowhile

Package implementing a do while loop in R.

extractpgrs icon extractpgrs

Set of scripts for extracting polygenic risk scores data from http://geneatlas.roslin.ed.ac.uk/ genomics files.

gendatamglmriem icon gendatamglmriem

Generate data structures for use in testing theories regarding MGLMRiem

gwasqc icon gwasqc

GWAS QC Script Implementation Based On V.N. Guidelines

limitedmemorylist icon limitedmemorylist

R package for managing lists with limited storage (maximum number of elements to be stored).

mglmriem icon mglmriem

Implementing the algorithms of Kim et al. 2014 for regressing multiple symmetric positive definite matrices against real valued covariates.

mvregress icon mvregress

Simple package wrapping some classic multivariate regression functions.

optimizeapa icon optimizeapa

Arbitrary Precision Arithmetic (APA) optimization algorithms implemented in R.

quicknmix icon quicknmix

R package for fitting asymptotic N mixture models.

rdict icon rdict

R package implementing a Dictionary data structure.

rednmix icon rednmix

Package for fitting and analyzing reduced/grouped N Mixture models.

westgridscriptexamples icon westgridscriptexamples

This is a repository for R Markdown documents which provide example scripts for use with Compute Canada's Westgrid (use at own risk, I am not affiliated with Compute Canada)

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