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Echo's Projects

autost icon autost

[WWW'2023] "Automated Spatio-Temporal Graph Contrastive Learning"

awesome-python-cn icon awesome-python-cn

Python资源大全中文版,包括:Web框架、网络爬虫、模板引擎、数据库、数据可视化、图片处理等,由「开源前哨」和「Python开发者」微信公号团队维护更新。

bds-files icon bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

beeline icon beeline

BEELINE: evaluation of algorithms for gene regulatory network inference

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⏰ Collaboratively track deadlines of conferences recommended by CCF (Website, Python Cli, Wechat Applet) / If you find it useful, please star this project, thanks~

cellrank icon cellrank

CellRank for directed single-cell fate mapping

cfc icon cfc

Closed-form Continuous-time Neural Networks

chipseeker icon chipseeker

:dart: ChIP peak Annotation, Comparison and Visualization

cil_survey icon cil_survey

The code repository for "Deep Class-Incremental Learning: A Survey" in PyTorch.

cstar_nature icon cstar_nature

Scripts used in the paper "Control of cell state transitions" by Rukhlenko et al.

cytocommunity icon cytocommunity

A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from cell phenotypes.

cytospace icon cytospace

CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data

cytotalk icon cytotalk

A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better characterization of cell-cell communication.

dccpp icon dccpp

Fast computation of Distance Correlation and Distance Covariance in R

dcor icon dcor

Distance correlation and related E-statistics in Python

dessolver icon dessolver

A Java-based Ordinary Differential Equation (ODE) System Solver Application...

dnb-bts icon dnb-bts

This repository provides source codes used in a paper entitled "Suppression of dynamical network biomarker signals at the pre-disease state (Mibyou) before metabolic syndrome in mice by a traditional Japanese medicine (Kampo formula) bofutsushosan".

drim icon drim

Deconvolution followed by Region-growing,Interpolation and iterative-Mapping

dynamo-release icon dynamo-release

Inclusive model of expression dynamics with metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

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