mousavikahaki Goto Github PK

autoencoder_graph_embedding

This python code compares different feature reduction methods for graph embedding. It is tested on MNIST data-set as well

automatedneurontracing

cellnucleisegmentation

Automated Cell Nuclei Segmentation for 2018 Data Science Bowl Using U-Net+Resnet34

deep-learning-age-assessment

folder-structure-conventions

Folder / directory structure options and naming conventions for software projects

intro-to-data-science-in-python

Repo for the first course of the Applied Data Science with Python Specialization taught by University of Michigan hosted by Coursera

kahaki.github.io

machine-learning-with-python

Python code for common Machine Learning Algorithms

machinelearningautomatedtracing

Deen Neural Network for automated neuron tracing on volumetric brain image datasets

mobilenet-ssd

Caffe implementation of Google MobileNet SSD detection network, with pretrained weights on VOC0712 and mAP=0.727.

mousavikahaki.github.io

Hosting

mpua

Model Preformance and Uncertainty Analysis

multinetworksegmentation

neuroglancer

WebGL-based viewer for volumetric data

neuronsegmentation3d

nnfilters

Artificial neural network filters for enhancing 3D optical microscopy images of neurites

nnfilters-1

Artificial neural network filters for enhancing 3D optical microscopy images of neurites

nucleisegmentation

AUTOMATED CELL NUCLEI SEGMENTATION FOR 2018 DATA SCIENCE BOWL USING U-NET+RESNET34

registrar

Registrar is a software for registration of 3D images in time and space

tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

traceproofreading

Machine Learning and Cusomized Features for Trace Proofreading in Automated Neural Tracing

validpath

Whole Slide Image Processing Toolbox

variational-autoencoder

generate MNIST using a Variational Autoencoder