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Måns Magnusson's Projects

awesome-todos icon awesome-todos

Web application for managing todos. Showcase of Flask and Backbone.js

booking icon booking

Small projekt to play around with flask

citation-file-format icon citation-file-format

The Citation File Format lets you provide citation metadata for software or datasets in plaintext files that are easy to read by both humans and machines.

cyvcf2 icon cyvcf2

cython + htslib == fast VCF parsing

extract_vcf icon extract_vcf

Python package to extract information from vcf files

fastq_parser icon fastq_parser

Guess quality and converts between different qualitys, needs Biopython

mongoengine icon mongoengine

A Python Object-Document-Mapper for working with MongoDB

mongomock icon mongomock

Small library for mocking pymongo collection objects for testing purposes

multiqc icon multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

peddy icon peddy

genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF

phizz icon phizz

Query hpo with phenotypes and OMIM terms

pybamview icon pybamview

Browser based application for viewing bam alignments

pyvcf icon pyvcf

A Variant Call Format reader for Python.

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