Error in hyp_hmap about hyper HOT 2 CLOSED

On Jan 20, 2022, at 4:34 PM, anfederico ***@***.***> wrote: Sorry this is a tough one to debug - so many nested functions! The reason this is failing is because one of the rgsets object. There is only one geneset Tetrapyrroles which meets the FDR=0.5 threshold and this geneset is not listed in the $nodes property of the rgsets object. So the error comes from no nodes to plot. Perhaps you can share how the rgsets object was constructed? That should solve the issue. Just need to make sure all of the $genesets are added as leaf-nodes to the $nodes property. rgset <- mhyp_obj1$data[[1]]$args$genesets # Not all nodes must be genesets (internal nodes) rgset$nodes$label %in% names(rgset$genesets) # All genesets should be nodes (leaf nodes) names(rgset$genesets) %in% rgset$nodes$label — Reply to this email directly, view it on GitHub <#41 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ACIAGH66GOCKIEVKE5CQHT3UXB5WLANCNFSM5MF7UQDA>. Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>. You are receiving this because you authored the thread.