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16s_from_liuyongxin

R code for 16S

5years_

the repository is for hospital project(nz),the tcga part is what I need

biobert-pytorch

PyTorch Implementation of BioBERT

bluebert

BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).

book_nbs-deep_learning_for_coder_-with_fastai_and_pytorch-

Notebooks for upcoming fastai book (draft / incomplete)

bubbleplot

BubblePlot for lipids

cell_blast

A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.

deep-learning-with-pytorch

Code for the book Deep Learning with PyTorch by Eli Stevens, Luca Antiga, and Thomas Viehmann.

geo

glue

Graph-linked unified embedding for single-cell multi-omics data integration

gpt_academic

为ChatGPT/GLM提供实用化交互界面，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm2等本地模型。兼容文心一言, moss, llama2, rwkv, claude2, 通义千问, 书生, 讯飞星火等。

guideline-for-computational-biology-and-bioinformatics

Always look new

joint-ner-and-re

This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "End-to-end Named Entity Recognition and Relation Extraction using Pre-trained Language Models".

k-ret_mls

K-RET: Knowledgeable Biomedical Relation Extraction System

linkbert

[ACL 2022] LinkBERT: A Knowledgeable Language Model 😎 Pretrained with Document Links

microbiomestatplot_from_liuyongxin

Interpretation and visualization of microbiome charts. The readme have some very useful information. Always look new.

molesong

molesong.github.io

可 fork 的博客教程模板

molesong_sanyecao.github.io

本项目为Pages静态博客示范，对应的演示网站地址为 👉

my_wgcna

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

r-bert

Pytorch implementation of R-BERT: "Enriching Pre-trained Language Model with Entity Information for Relation Classification"

scrna_smart_seq2

sle-immuneatlas

scRNA and scVDJ analysis for SLE(系统性红斑狼疮) samples.

tcga_example

tidymass

tidymass

vmap1.1-population_history_of_wheats

Some codes about evolutionary history of wheats