restrict-regions and short contigs about grenepipe HOT 2 OPEN

Just to update (for the benefit of others who may want to do something similar):
As expected, the combination of both contig-group-size and restrict-regions resulted in a large number of jobs. However, the jobs for contigs without overlaps with the intervals.bed file finished within seconds. In conclusion: spurious jobs and files but fortunately not too much increase in total computation time.

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Dear @RvV1979,

indeed, that is a combination of features that is a bit tricky to implement, and I will unfortunately not have the time for that in the foreseeable future. Hope it's okay that I cannot promise a timeline on implementing this.

Let's keep this issue open for now. And in the future, anyone else who wants to do something similar, please feel free to comment here to bump this up in priority in my implementation back log :-)

Also, thank you for reporting your experience with just running it as-is. That sounds like it's generally workable, with some overhead in terms of job submissions and files created. That is good to know!

All the best
Lucas

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